WormBase Tree Display for CDS: PPA00238
expand all nodes | collapse all nodes | view schema
PPA00238 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 24 | |||
92 | 125 | |||||
1256 | 1339 | |||||
1893 | 1982 | |||||
2058 | 2102 | |||||
2248 | 2343 | |||||
2468 | 2589 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-32.2 | ||
TREEFAM | TREEFAM_ID | TF320874 | ||||
DB_remark | PPA-NLP-14 protein; contains similarity to Interpro domain IPR040384 (Orcokinin peptides type A/B) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00089792 | ||||
Corresponding_transcript | PPA00238.1 | |||||
Corresponding_protein | PP20871 | |||||
Corresponding_oligo_set | GPL14372_Probes_9598 | |||||
Microarray_results | GPL14372_Probes_9598 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-32.2 | Curator_confirmed | WBPerson4055 | |||
Method | curated |