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WormBase Tree Display for CDS: PPA00239

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Name Class

PPA00239SMapS_parentSequencePPA_ChrI
StructureSource_exons (54)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-32.53
TREEFAMTREEFAM_IDTF300655
DB_remarkcontains similarity to Pfam domains PF00326 (Prolyl oligopeptidase family), PF02897 (Prolyl oligopeptidase, N-terminal beta-propeller domain); contains similarity to Interpro domains IPR001375 (Peptidase S9, prolyl oligopeptidase, catalytic domain), IPR002470 (Peptidase S9A, prolyl oligopeptidase), IPR029058 (Alpha/Beta hydrolase fold), IPR023302 (Peptidase S9A, N-terminal domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00089793
Corresponding_transcriptPPA00239.1
Corresponding_proteinPP62422
Corresponding_oligo_setGPL14372_Probes_55296
GPL14372_Probes_55299
GPL14372_Probes_55300
GPL14372_Probes_55302
GPL14372_Probes_55303
GPL14372_Probes_55304
GPL14372_Probes_55305
GPL14372_Probes_55306
Microarray_resultsGPL14372_Probes_55296
GPL14372_Probes_55299
GPL14372_Probes_55300
GPL14372_Probes_55302
GPL14372_Probes_55303
GPL14372_Probes_55304
GPL14372_Probes_55305
GPL14372_Probes_55306
RNASeq_FPKMWBls:00000325.09372From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.3271From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-32.53Curator_confirmedWBPerson4055
Methodcurated