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WormBase Tree Display for CDS: PPA00260

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Name Class

PPA00260SMapS_parentSequencePPA_ChrI
StructureSource_exons (32)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-34.30
DB_remarkcontains similarity to Pfam domain PF00640 (Phosphotyrosine interaction domain (PTB/PID)); contains similarity to Interpro domains IPR011993 (PH-like domain superfamily), IPR006020 (PTB/PI domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00089814
Corresponding_transcriptPPA00260.1
Corresponding_proteinPP53367
Corresponding_oligo_setGPL14372_Probes_34201
GPL14372_Probes_34202
GPL14372_Probes_55339
GPL14372_Probes_55340
GPL14372_Probes_55344
GPL14372_Probes_55345
GPL14372_Probes_9620
GPL14372_Probes_9621
Matching_cDNAFE933019Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_9620
GPL14372_Probes_9621
GPL14372_Probes_34201
GPL14372_Probes_34202
GPL14372_Probes_55339
GPL14372_Probes_55340
GPL14372_Probes_55344
GPL14372_Probes_55345
RNASeq_FPKMWBls:000003297.4871From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010191.5783From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-34.30Curator_confirmedWBPerson4055
Methodcurated