WormBase Tree Display for CDS: PPA00266
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| PPA00266 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (38) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S57-34.21 | ||
| TREEFAM | TREEFAM_ID | TF315349 | ||||
| DB_remark | contains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF14625 (Lustrin, cysteine-rich repeated domain); contains similarity to Interpro domains IPR028150 (Lustrin, cysteine-rich repeated), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR006150 (Cysteine-rich repeat) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00089820 | ||||
| Corresponding_transcript | PPA00266.1 | |||||
| Corresponding_protein | PP67490 | |||||
| Corresponding_oligo_set | GPL14372_Probes_55360 | |||||
| GPL14372_Probes_55361 | ||||||
| GPL14372_Probes_55364 | ||||||
| GPL14372_Probes_55365 | ||||||
| GPL14372_Probes_55366 | ||||||
| GPL14372_Probes_55367 | ||||||
| GPL14372_Probes_55368 | ||||||
| Microarray_results | GPL14372_Probes_55360 | |||||
| GPL14372_Probes_55361 | ||||||
| GPL14372_Probes_55364 | ||||||
| GPL14372_Probes_55365 | ||||||
| GPL14372_Probes_55366 | ||||||
| GPL14372_Probes_55367 | ||||||
| GPL14372_Probes_55368 | ||||||
| RNASeq_FPKM | WBls:0000032 | 3.99667 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S57-34.21 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
