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WormBase Tree Display for CDS: PPA00279

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Name Class

PPA00279SMapS_parentSequencePPA_ChrI
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S57-35.20
DB_remarkcontains similarity to Pfam domain PF01062 (Bestrophin, RFP-TM, chloride channel); contains similarity to Interpro domains IPR000615 (Bestrophin), IPR021134 (Bestrophin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00089833
Corresponding_transcriptPPA00279.1
Corresponding_proteinPP51425
Corresponding_oligo_setGPL14372_Probes_55380
GPL14372_Probes_9651
GPL14372_Probes_9652
GPL14372_Probes_9653
GPL14372_Probes_9654
GPL14372_Probes_9655
Microarray_resultsGPL14372_Probes_9651
GPL14372_Probes_9652
GPL14372_Probes_9653
GPL14372_Probes_9654
GPL14372_Probes_9655
GPL14372_Probes_55380
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S57-35.20Curator_confirmedWBPerson4055
Methodcurated