WormBase Tree Display for CDS: PPA00296

PPA00296 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 458
      968 998
      1186 1266
      1450 1506
      1636 1743
      1907 2000
      2046 2545
  DB_info: Database: pristionchus.org cds gene-UMM-S57-36.7
    DB_remark: contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00089850
    Corresponding_transcript: PPA00296.1
    Corresponding_protein: PP58339
    Corresponding_oligo_set: GPL14372_Probes_9667
    Microarray_results: GPL14372_Probes_9667
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S57-36.7 Curator_confirmed: WBPerson4055
  Method: curated