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WormBase Tree Display for CDS: PPA00309

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Name Class

PPA00309SMapS_parentSequencePPA_ChrI
StructureSource_exons (12)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-36.15
TREEFAMTREEFAM_IDTF314125
DB_remarkPPA-WDR-5.1 protein; contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR037866 (), IPR020472 (G-protein beta WD-40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00089863
Corresponding_transcriptPPA00309.1
Corresponding_proteinPP64378
Corresponding_oligo_setGPL14372_Probes_55416
GPL14372_Probes_55417
Microarray_resultsGPL14372_Probes_55416
GPL14372_Probes_55417
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-36.15Curator_confirmedWBPerson4055
Methodcurated