WormBase Tree Display for CDS: PPA00338
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PPA00338 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-38.66 | ||
TREEFAM | TREEFAM_ID | TF354217 | ||||
DB_remark | contains similarity to Pfam domains PF00069 (Protein kinase domain), PF11629 (C terminal SARAH domain of Mst1); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR024205 (Mst1/2 SARAH domain), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00089892 | ||||
Corresponding_transcript | PPA00338.1 | |||||
Corresponding_protein | PP53806 | |||||
Corresponding_oligo_set | GPL14372_Probes_55505 | |||||
Microarray_results | GPL14372_Probes_55505 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-38.66 | Curator_confirmed | WBPerson4055 | |||
Method | curated |