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WormBase Tree Display for CDS: PPA00338

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Name Class

PPA00338SMapS_parentSequencePPA_ChrI
StructureSource_exons (17)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-38.66
TREEFAMTREEFAM_IDTF354217
DB_remarkcontains similarity to Pfam domains PF00069 (Protein kinase domain), PF11629 (C terminal SARAH domain of Mst1); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR024205 (Mst1/2 SARAH domain), IPR000719 (Protein kinase domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00089892
Corresponding_transcriptPPA00338.1
Corresponding_proteinPP53806
Corresponding_oligo_setGPL14372_Probes_55505
Microarray_resultsGPL14372_Probes_55505
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-38.66Curator_confirmedWBPerson4055
Methodcurated