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WormBase Tree Display for CDS: PPA00346

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Name Class

PPA00346SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S57-38.76
TREEFAMTREEFAM_IDTF317943
DB_remarkcontains similarity to Pfam domain PF02536 (mTERF); contains similarity to Interpro domains IPR038538 (MTERF superfamily, mitochondrial/chloroplastic), IPR003690 (Transcription termination factor, mitochondrial/chloroplastic)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00089900
Corresponding_transcriptPPA00346.1
Corresponding_proteinPP74298
Corresponding_oligo_setGPL14372_Probes_55515
Microarray_resultsGPL14372_Probes_55515
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S57-38.76Curator_confirmedWBPerson4055
Methodcurated