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WormBase Tree Display for CDS: PPA00410

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Name Class

PPA00410SMapS_parentSequencePPA_ChrI
StructureSource_exons (64)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-52.31
DB_remarkcontains similarity to Pfam domains PF01697 (Glycosyltransferase family 92), PF02463 (RecF/RecN/SMC N terminal domain), PF06470 (SMC proteins Flexible Hinge Domain); contains similarity to Interpro domains IPR003395 (RecF/RecN/SMC, N-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR036277 (SMCs flexible hinge superfamily), IPR010935 (SMCs flexible hinge), IPR008166 (Glycosyltransferase family 92)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00089964
Corresponding_transcriptPPA00410.1
Corresponding_proteinPP73411
Corresponding_oligo_set (14)
Matching_cDNAFE940685Inferred_automaticallytranscript_builder.pl
Microarray_results (14)
RNASeq_FPKMWBls:000003214.2558From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.58996From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-52.31Curator_confirmedWBPerson4055
Methodcurated