WormBase Tree Display for CDS: PPA00450
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PPA00450 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (82) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S57-45.41 | ||
DB_remark | PPA-ZNFX-1 protein; contains similarity to Pfam domains PF13086 (AAA domain), PF13087 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR041677 (DNA2/NAM7 helicase, helicase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00090004 | ||||
Corresponding_transcript | PPA00450.1 | |||||
Corresponding_protein | PP71368 | |||||
Corresponding_oligo_set (15) | ||||||
Microarray_results (15) | ||||||
RNASeq_FPKM | WBls:0000032 | 3.15516 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.06455 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S57-45.41 | Curator_confirmed | WBPerson4055 | |||
Method | curated |