WormBase Tree Display for CDS: PPA00476

PPA00476 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (15)
  DB_info: Database: pristionchus.org cds gene-UMM-S57-46.49
    DB_remark: contains similarity to Pfam domains PF00104 (Ligand-binding domain of nuclear hormone receptor), PF00105 (Zinc finger, C4 type (two domains)); contains similarity to Interpro domains IPR013088 (Zinc finger, NHR/GATA-type), IPR001628 (Zinc finger, nuclear hormone receptor-type), IPR000536 (Nuclear hormone receptor, ligand-binding domain), IPR035500 (Nuclear hormone receptor-like domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00090030
    Corresponding_transcript: PPA00476.1
    Corresponding_protein: PP69905
    Corresponding_oligo_set: GPL14372_Probes_9939
      GPL14372_Probes_9940
      GPL14372_Probes_9941
      GPL14372_Probes_9942
    Microarray_results: GPL14372_Probes_9939
      GPL14372_Probes_9940
      GPL14372_Probes_9941
      GPL14372_Probes_9942
    RNASeq_FPKM: WBls:0000032 30.9625 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S57-46.49 Curator_confirmed: WBPerson4055
  Method: curated