WormBase Tree Display for CDS: PPA01328
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| PPA01328 | SMap | S_parent | Sequence | PPA_ChrX | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 780 | |||
| DB_info | Database | pristionchus.org | cds | gene-UMS-S328-7.30 | ||
| DB_remark | PPA-COL-34.1 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies)); contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00090882 | ||||
| Corresponding_transcript | PPA01328.1 | |||||
| Corresponding_protein | PP51844 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMS-S328-7.30 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
