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WormBase Tree Display for CDS: PPA01683

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Name Class

PPA01683SMapS_parentSequencePPA_ChrII
StructureSource_exons148
254338
813905
13461470
16881759
33403465
37403811
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-3.13
TREEFAMTREEFAM_IDTF353041
DB_remarkcontains similarity to Pfam domains PF02798 (Glutathione S-transferase, N-terminal domain), PF14497 (Glutathione S-transferase, C-terminal domain); contains similarity to Interpro domains IPR004046 (Glutathione S-transferase, C-terminal), IPR004045 (Glutathione S-transferase, N-terminal), IPR036282 (Glutathione S-transferase, C-terminal domain superfamily), IPR036249 (Thioredoxin-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00091237
Corresponding_transcriptPPA01683.1
Corresponding_proteinPP47942
Corresponding_oligo_setGPL14372_Probes_82394
GPL14372_Probes_82395
Microarray_resultsGPL14372_Probes_82394
GPL14372_Probes_82395
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-3.13Curator_confirmedWBPerson4055
Methodcurated