WormBase Tree Display for CDS: PPA01743
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PPA01743 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (15) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S112-20.32 | ||
TREEFAM | TREEFAM_ID | TF300196 | ||||
DB_remark | PPA-RPS-12 protein; contains similarity to Pfam domain PF08449 (UAA transporter family); contains similarity to Interpro domains IPR013657 (SLC35B1-4/HUT1), IPR029064 (Ribosomal protein eL30-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00091297 | ||||
Corresponding_transcript | PPA01743.1 | |||||
Corresponding_protein | PP69976 | |||||
Corresponding_oligo_set | GPL14372_Probes_40251 | |||||
GPL14372_Probes_40252 | ||||||
GPL14372_Probes_40253 | ||||||
GPL14372_Probes_40254 | ||||||
Microarray_results | GPL14372_Probes_40251 | |||||
GPL14372_Probes_40252 | ||||||
GPL14372_Probes_40253 | ||||||
GPL14372_Probes_40254 | ||||||
RNASeq_FPKM | WBls:0000032 | 15.0404 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 44.4089 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S112-20.32 | Curator_confirmed | WBPerson4055 | |||
Method | curated |