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WormBase Tree Display for CDS: PPA01874

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Name Class

PPA01874SMapS_parentSequencePPA_ChrI
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-6.9
DB_remarkcontains similarity to Pfam domain PF00106 (short chain dehydrogenase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR), IPR013087 (Zinc finger C2H2-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00091428
Corresponding_transcriptPPA01874.1
Corresponding_proteinPP57711
Corresponding_oligo_setGPL14372_Probes_15422
GPL14372_Probes_15424
GPL14372_Probes_15425
GPL14372_Probes_38031
GPL14372_Probes_62593
GPL14372_Probes_62594
GPL14372_Probes_62595
GPL14372_Probes_62596
GPL14372_Probes_62597
Microarray_resultsGPL14372_Probes_15422
GPL14372_Probes_15424
GPL14372_Probes_15425
GPL14372_Probes_38031
GPL14372_Probes_62593
GPL14372_Probes_62594
GPL14372_Probes_62595
GPL14372_Probes_62596
GPL14372_Probes_62597
RNASeq_FPKMWBls:00000324.8127From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.1367From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-6.9Curator_confirmedWBPerson4055
Methodcurated