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WormBase Tree Display for CDS: PPA01916

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Name Class

PPA01916SMapS_parentSequencePPA_ChrI
StructureSource_exons (109)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S259-8.9
DB_remarkcontains similarity to Pfam domains PF00858 (Amiloride-sensitive sodium channel), PF01663 (Type I phosphodiesterase / nucleotide pyrophosphatase), PF08217 (); contains similarity to Interpro domains IPR002591 (Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase), IPR013176 (Vacuolar fusion protein Ccz1), IPR001873 (Epithelial sodium channel), IPR017850 (Alkaline-phosphatase-like, core domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00091470
Corresponding_transcriptPPA01916.1
Corresponding_proteinPP56590
Corresponding_oligo_set (22)
Microarray_results (22)
RNASeq_FPKMWBls:00000324.66255From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.83531From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S259-8.9Curator_confirmedWBPerson4055
Methodcurated