WormBase Tree Display for CDS: PPA01990
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PPA01990 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (68) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-67.27 | ||
DB_remark | contains similarity to Pfam domain PF00328 (Histidine phosphatase superfamily (branch 2)); contains similarity to Interpro domains IPR000560 (Histidine phosphatase superfamily, clade-2), IPR029033 (Histidine phosphatase superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00091544 | ||||
Corresponding_transcript | PPA01990.1 | |||||
Corresponding_protein | PP64903 | |||||
Corresponding_oligo_set (20) | ||||||
Matching_cDNA | AW114930 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results (20) | ||||||
RNASeq_FPKM | WBls:0000032 | 3.05937 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-67.27 | Curator_confirmed | WBPerson4055 | |||
Method | curated |