WormBase Tree Display for CDS: PPA02067
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PPA02067 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 126 | |||
320 | 373 | |||||
519 | 575 | |||||
1179 | 1256 | |||||
1648 | 1752 | |||||
2148 | 2210 | |||||
2377 | 2431 | |||||
2605 | 2672 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-54.38 | ||
TREEFAM | TREEFAM_ID | TF315736 | ||||
DB_remark | PPA-CAV-2 protein; contains similarity to Pfam domain PF01146 (Caveolin); contains similarity to Interpro domain IPR001612 (Caveolin) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00091621 | ||||
Corresponding_transcript | PPA02067.1 | |||||
Corresponding_protein | PP64848 | |||||
Corresponding_oligo_set | GPL14372_Probes_91524 | |||||
GPL14372_Probes_91525 | ||||||
GPL14372_Probes_91528 | ||||||
Microarray_results | GPL14372_Probes_91524 | |||||
GPL14372_Probes_91525 | ||||||
GPL14372_Probes_91528 | ||||||
RNASeq_FPKM | WBls:0000032 | 104.077 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-54.38 | Curator_confirmed | WBPerson4055 | |||
Method | curated |