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WormBase Tree Display for CDS: PPA02247

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Name Class

PPA02247EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrIV
StructureSource_exons (13)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2838-7.64
DB_remarkcontains similarity to Pfam domain PF00149 (Calcineurin-like phosphoesterase); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00091801
Corresponding_transcriptPPA02247.1
Corresponding_proteinPP75794
Corresponding_oligo_setGPL14372_Probes_87583
GPL14372_Probes_87584
Microarray_resultsGPL14372_Probes_87583
GPL14372_Probes_87584
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.2287From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed03 Dec 2019 15:15:16WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S2838-7.64Curator_confirmedWBPerson4055
[191203 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated