WormBase Tree Display for CDS: PPA02647
expand all nodes | collapse all nodes | view schema
PPA02647 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 61 | |||
144 | 213 | |||||
303 | 378 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-30.0 | ||
DB_remark | contains similarity to Pfam domain PF08036 (Diapausin family of antimicrobial peptide); contains similarity to Interpro domain IPR038203 (Diapausin superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00092201 | ||||
Corresponding_transcript | PPA02647.1 | |||||
Corresponding_protein | PP04951 | |||||
Corresponding_oligo_set | GPL14372_Probes_35973 | |||||
Microarray_results | GPL14372_Probes_35973 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-30.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |