Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA02878

expand all nodes | collapse all nodes | view schema

Name Class

PPA02878SMapS_parentSequencePPA_ChrII
StructureSource_exons (40)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-66.8
DB_remarkPPA-GLDC-1 protein; contains similarity to Pfam domains PF00226 (DnaJ domain), PF01556 (DnaJ C terminal domain), PF02347 (Glycine cleavage system P-protein); contains similarity to Interpro domains IPR008971 (HSP40/DnaJ peptide-binding), IPR002939 (Chaperone DnaJ, C-terminal), IPR001623 (DnaJ domain), IPR015424 (Pyridoxal phosphate-dependent transferase), IPR015421 (Pyridoxal phosphate-dependent transferase, major domain), IPR020581 (Glycine cleavage system P protein), IPR036869 (Chaperone J-domain superfamily), IPR015422 (Pyridoxal phosphate-dependent transferase, small domain), IPR003437 (Glycine dehydrogenase (decarboxylating))
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00092432
Corresponding_transcriptPPA02878.1
Corresponding_proteinPP51447
Corresponding_oligo_setGPL14372_Probes_65763
GPL14372_Probes_65764
GPL14372_Probes_65765
GPL14372_Probes_65767
GPL14372_Probes_65769
GPL14372_Probes_65771
GPL14372_Probes_65772
Microarray_resultsGPL14372_Probes_65763
GPL14372_Probes_65764
GPL14372_Probes_65765
GPL14372_Probes_65767
GPL14372_Probes_65769
GPL14372_Probes_65771
GPL14372_Probes_65772
RNASeq_FPKMWBls:00000322.66595From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010116.7909From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-66.8Curator_confirmedWBPerson4055
Methodcurated