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WormBase Tree Display for CDS: PPA02991

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Name Class

PPA02991SMapS_parentSequencePPA_ChrI
StructureSource_exons (31)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-64.14
TREEFAMTREEFAM_IDTF318600
DB_remarkcontains similarity to Pfam domain PF00112 (Papain family cysteine protease); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR013201 (Cathepsin propeptide inhibitor domain (I29)), IPR003961 (Fibronectin type III), IPR000668 (Peptidase C1A, papain C-terminal), IPR036116 (Fibronectin type III superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00092545
Corresponding_transcriptPPA02991.1
Corresponding_proteinPP60808
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:00000321.28397From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.6142From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-64.14Curator_confirmedWBPerson4055
Methodcurated