WormBase Tree Display for CDS: PPA02996
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PPA02996 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-63.4 | ||
TREEFAM | TREEFAM_ID | TF314954 | ||||
DB_remark | contains similarity to Pfam domain PF00883 (Cytosol aminopeptidase family, catalytic domain); contains similarity to Interpro domains IPR000819 (Peptidase M17, leucyl aminopeptidase, C-terminal), IPR011356 (Peptidase M17, leucine aminopeptidase/peptidase B) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00092550 | ||||
Corresponding_transcript | PPA02996.1 | |||||
Corresponding_protein | PP64704 | |||||
Corresponding_oligo_set | GPL14372_Probes_53700 | |||||
GPL14372_Probes_53701 | ||||||
Microarray_results | GPL14372_Probes_53700 | |||||
GPL14372_Probes_53701 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.73158 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-63.4 | Curator_confirmed | WBPerson4055 | |||
Method | curated |