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WormBase Tree Display for CDS: PPA03064

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Name Class

PPA03064SMapS_parentSequencePPA_ChrI
StructureSource_exons (25)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-60.15
DB_remarkPPA-LIN-23 protein; contains similarity to Pfam domains PF00400 (WD domain, G-beta repeat), PF00646 (F-box domain), PF12125 (D domain of beta-TrCP); contains similarity to Interpro domains IPR021977 (D domain of beta-TrCP), IPR001680 (WD40 repeat), IPR036047 (F-box-like domain superfamily), IPR036322 (WD40-repeat-containing domain superfamily), IPR001810 (F-box domain), IPR020472 (G-protein beta WD-40 repeat), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00092618
Corresponding_transcriptPPA03064.1
Corresponding_proteinPP57988
Corresponding_oligo_setGPL14372_Probes_8692
GPL14372_Probes_8693
Microarray_resultsGPL14372_Probes_8692
GPL14372_Probes_8693
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-60.15Curator_confirmedWBPerson4055
Methodcurated