WormBase Tree Display for CDS: PPA03076

PPA03076 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons (11)
  DB_info: Database: pristionchus.org cds gene-UMM-S41-6.3
      TREEFAM TREEFAM_ID TF314548
    DB_remark: contains similarity to Pfam domains PF00389 (D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain), PF02826 (D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR006140 (D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain), IPR006139 (D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00092630
    Corresponding_transcript: PPA03076.1
    Corresponding_protein: PP53602
    Corresponding_oligo_set: GPL14372_Probes_85724
      GPL14372_Probes_85725
      GPL14372_Probes_85726
      GPL14372_Probes_85727
    Microarray_results: GPL14372_Probes_85724
      GPL14372_Probes_85725
      GPL14372_Probes_85726
      GPL14372_Probes_85727
    RNASeq_FPKM: WBls:0000032 45.7197 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.40047 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S41-6.3 Curator_confirmed: WBPerson4055
  Method: curated