WormBase Tree Display for CDS: PPA03096
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PPA03096 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (17) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-7.50 | ||
DB_remark | contains similarity to Pfam domain PF00241 (Cofilin/tropomyosin-type actin-binding protein); contains similarity to Interpro domains IPR002108 (Actin-depolymerising factor homology domain), IPR029006 (ADF-H/Gelsolin-like domain superfamily), IPR007767 (Protein of unknown function DUF684) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00092650 | ||||
Corresponding_transcript | PPA03096.1 | |||||
Corresponding_protein | PP67307 | |||||
Corresponding_oligo_set | GPL14372_Probes_85775 | |||||
Microarray_results | GPL14372_Probes_85775 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 6.59377 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-7.50 | Curator_confirmed | WBPerson4055 | |||
Method | curated |