WormBase Tree Display for CDS: PPA03839
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PPA03839 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrX | |||
Structure | Source_exons | 1 | 90 | |||
138 | 217 | |||||
263 | 346 | |||||
428 | 569 | |||||
712 | 774 | |||||
1016 | 1102 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2859-13.46 | ||
DB_remark | contains similarity to Pfam domain PF00042 (Globin); contains similarity to Interpro domains IPR000971 (Globin), IPR012292 (Globin/Protoglobin), IPR009050 (Globin-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00093393 | ||||
Corresponding_transcript | PPA03839.1 | |||||
Corresponding_protein | PP03810 | |||||
Corresponding_oligo_set | GPL14372_Probes_39097 | |||||
Microarray_results | GPL14372_Probes_39097 | |||||
RNASeq_FPKM | WBls:0000032 | 18.8093 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2859-13.46 | Curator_confirmed | WBPerson4055 | |||
Method | curated |