WormBase Tree Display for CDS: PPA03988

PPA03988 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (13)
  DB_info: Database: pristionchus.org cds gene-UMM-S2844-50.42
      TREEFAM TREEFAM_ID TF106176
    DB_remark: PPA-HDA-11 protein; contains similarity to Pfam domain PF00850 (Histone deacetylase domain); contains similarity to Interpro domains IPR023696 (Ureohydrolase domain superfamily), IPR023801 (Histone deacetylase domain), IPR000286 (Histone deacetylase family), IPR037138 (Histone deacetylase domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00093542
    Corresponding_transcript: PPA03988.1
    Corresponding_protein: PP40489
    Corresponding_oligo_set: GPL14372_Probes_33618
      GPL14372_Probes_33619
      GPL14372_Probes_33620
      GPL14372_Probes_33621
      GPL14372_Probes_33622
    Microarray_results: GPL14372_Probes_33618
      GPL14372_Probes_33619
      GPL14372_Probes_33620
      GPL14372_Probes_33621
      GPL14372_Probes_33622
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S2844-50.42 Curator_confirmed: WBPerson4055
  Method: curated