WormBase Tree Display for CDS: PPA04226
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| PPA04226 | SMap | S_parent | Sequence | PPA_ChrIV | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (35) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S2847-11.4 | ||
| DB_remark | contains similarity to Pfam domains PF00069 (Protein kinase domain), PF00211 (Adenylate and Guanylate cyclase catalytic domain), PF01094 (Receptor family ligand binding region); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR029787 (Nucleotide cyclase), IPR001828 (Receptor, ligand binding region), IPR028082 (Periplasmic binding protein-like I), IPR000719 (Protein kinase domain), IPR001054 (Adenylyl cyclase class-3/4/guanylyl cyclase) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00093780 | ||||
| Corresponding_transcript | PPA04226.1 | |||||
| Corresponding_protein | PP56129 | |||||
| RNASeq_FPKM | WBls:0000032 | 1.04983 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S2847-11.4 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
