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WormBase Tree Display for CDS: PPA04237

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Name Class

PPA04237SMapS_parentSequencePPA_ChrIV
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S283-12.5
DB_remarkcontains similarity to Pfam domain PF04155 (Ground-like domain); contains similarity to Interpro domains IPR007284 (Ground-like domain), IPR008972 (Cupredoxin)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00093791
Corresponding_transcriptPPA04237.1
Corresponding_proteinPP53019
Corresponding_oligo_setGPL14372_Probes_37766
GPL14372_Probes_37767
GPL14372_Probes_37769
GPL14372_Probes_37770
GPL14372_Probes_37771
GPL14372_Probes_37772
Matching_cDNAFG098317Inferred_automaticallytranscript_builder.pl
BI500167Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_37766
GPL14372_Probes_37767
GPL14372_Probes_37769
GPL14372_Probes_37770
GPL14372_Probes_37771
GPL14372_Probes_37772
RNASeq_FPKMWBls:00000323.14353From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.71284From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S283-12.5Curator_confirmedWBPerson4055
Methodcurated