WormBase Tree Display for CDS: PPA04281
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PPA04281 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-18.54 | ||
DB_remark | contains similarity to Pfam domains PF02275 (Linear amide C-N hydrolases, choloylglycine hydrolase family), PF15508 (beta subunit of N-acylethanolamine-hydrolyzing acid amidase); contains similarity to Interpro domains IPR029132 (Choloylglycine hydrolase/NAAA C-terminal), IPR029130 (Acid ceramidase, N-terminal) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00093835 | ||||
Corresponding_transcript | PPA04281.1 | |||||
Corresponding_protein | PP69629 | |||||
Corresponding_oligo_set | GPL14372_Probes_38553 | |||||
GPL14372_Probes_38554 | ||||||
GPL14372_Probes_38555 | ||||||
Microarray_results | GPL14372_Probes_38553 | |||||
GPL14372_Probes_38554 | ||||||
GPL14372_Probes_38555 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.72225 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 22.5062 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-18.54 | Curator_confirmed | WBPerson4055 | |||
Method | curated |