WormBase Tree Display for CDS: PPA04475
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PPA04475 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 3 | |||
643 | 736 | |||||
1107 | 1211 | |||||
2729 | 2823 | |||||
3216 | 3308 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-81.5 | ||
DB_remark | contains similarity to Pfam domain PF13913 (zinc-finger of a C2HC-type); contains similarity to Interpro domain IPR026319 (Zinc finger C2HC domain-containing protein 1A/B-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00094029 | ||||
Corresponding_transcript | PPA04475.1 | |||||
Corresponding_protein | PP69699 | |||||
Corresponding_oligo_set | GPL14372_Probes_60216 | |||||
GPL14372_Probes_60217 | ||||||
GPL14372_Probes_60218 | ||||||
Microarray_results | GPL14372_Probes_60216 | |||||
GPL14372_Probes_60217 | ||||||
GPL14372_Probes_60218 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S7-81.5 | Curator_confirmed | WBPerson4055 | |||
Method | curated |