WormBase Tree Display for CDS: PPA04504
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| PPA04504 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (29) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S10-10.12 | ||
| DB_remark | contains similarity to Pfam domains PF01398 (JAB1/Mov34/MPN/PAD-1 ubiquitin protease), PF02225 (PA domain); contains similarity to Interpro domains IPR000555 (JAB1/MPN/MOV34 metalloenzyme domain), IPR003137 (PA domain), IPR035299 () | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00094058 | ||||
| Corresponding_transcript | PPA04504.1 | |||||
| Corresponding_protein | PP63045 | |||||
| RNASeq_FPKM | WBls:0000032 | 1.7407 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 14.3903 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S10-10.12 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
