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WormBase Tree Display for CDS: PPA04517

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Name Class

PPA04517SMapS_parentSequencePPA_ChrI
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-79.36
DB_remarkcontains similarity to Pfam domain PF01466 (Skp1 family, dimerisation domain); contains similarity to Interpro domains IPR001232 (S-phase kinase-associated protein 1-like), IPR036296 (SKP1-like, dimerisation domain superfamily), IPR016072 (SKP1 component, dimerisation), IPR011333 (SKP1/BTB/POZ domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00094071
Corresponding_transcriptPPA04517.1
Corresponding_proteinPP58541
Corresponding_oligo_setGPL14372_Probes_13336
GPL14372_Probes_13337
GPL14372_Probes_13338
GPL14372_Probes_13339
GPL14372_Probes_13340
GPL14372_Probes_13341
GPL14372_Probes_13342
GPL14372_Probes_13344
GPL14372_Probes_13345
Microarray_resultsGPL14372_Probes_13336
GPL14372_Probes_13337
GPL14372_Probes_13338
GPL14372_Probes_13339
GPL14372_Probes_13340
GPL14372_Probes_13341
GPL14372_Probes_13342
GPL14372_Probes_13344
GPL14372_Probes_13345
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S7-79.36Curator_confirmedWBPerson4055
Methodcurated