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WormBase Tree Display for CDS: PPA04724

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Name Class

PPA04724SMapS_parentSequencePPA_ChrII
StructureSource_exons1141
507602
14891561
18072468
DB_infoDatabasepristionchus.orgcdsgene-UMM-S273-1.13
TREEFAMTREEFAM_IDTF316783
DB_remarkPPA-COL-65 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00094278
Corresponding_transcriptPPA04724.1
Corresponding_proteinPP03701
Corresponding_oligo_setGPL14372_Probes_79212
Matching_cDNAFE934032Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_79212
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S273-1.13Curator_confirmedWBPerson4055
Methodcurated