WormBase Tree Display for CDS: PPA04733
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PPA04733 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-2.29 | ||
DB_remark | contains similarity to Pfam domain PF02615 (Malate/L-lactate dehydrogenase); contains similarity to Interpro domains IPR003767 (Malate/L-lactate dehydrogenase-like), IPR043144 (Malate/L-sulfolactate/L-lactate dehydrogenase-like, alpha-helical domain), IPR043143 (Malate/L-sulfolactate/L-lactate dehydrogenase-like, NADPH binding domain), IPR036111 (Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00094287 | ||||
Corresponding_transcript | PPA04733.1 | |||||
Corresponding_protein | PP60026 | |||||
Corresponding_oligo_set | GPL14372_Probes_79233 | |||||
Microarray_results | GPL14372_Probes_79233 | |||||
RNASeq_FPKM | WBls:0000032 | 11.982 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 32.348 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S273-2.29 | Curator_confirmed | WBPerson4055 | |||
Method | curated |