WormBase Tree Display for CDS: PPA04738b
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PPA04738b | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (26) | |||||
DB_info | DB_remark | PPA-CUP-5 protein; contains similarity to Pfam domain PF08016 (Polycystin cation channel); contains similarity to Interpro domains IPR039031 (Mucolipin), IPR013122 (Polycystin cation channel, PKD1/PKD2) | ||||
Origin | From_laboratory | HX | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
Prediction_status | Predicted | |||||
Isoform | Curator_confirmed | WBPerson4055 | ||||
Visible | Gene | WBGene00094292 | ||||
Corresponding_transcript | PPA04738b.1 | |||||
Corresponding_protein | PP74956 | |||||
Corresponding_oligo_set | GPL14372_Probes_25273 | |||||
GPL14372_Probes_25274 | ||||||
GPL14372_Probes_25275 | ||||||
GPL14372_Probes_25276 | ||||||
Microarray_results | GPL14372_Probes_25273 | |||||
GPL14372_Probes_25274 | ||||||
GPL14372_Probes_25275 | ||||||
GPL14372_Probes_25276 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 31 Jul 2019 14:51:16 | WBPerson4055 | ||||
Remark | [190731 mh6] This structure has been created based on the RNASeq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |