WormBase Tree Display for CDS: PPA05045
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PPA05045 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons (60) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2847-27.0 | ||
DB_remark | PPA-NMY-3 protein; contains similarity to Pfam domain PF00063 (Myosin head (motor domain)); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR027401 (), IPR036961 (Kinesin motor domain superfamily), IPR001609 (Myosin head, motor domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00094599 | ||||
Corresponding_transcript | PPA05045.1 | |||||
Corresponding_protein | PP59431 | |||||
Corresponding_oligo_set | GPL14372_Probes_40740 | |||||
GPL14372_Probes_40741 | ||||||
Microarray_results | GPL14372_Probes_40740 | |||||
GPL14372_Probes_40741 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2847-27.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |