WormBase Tree Display for CDS: PPA05109
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| PPA05109 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (12) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-29.38 | ||
| DB_remark | contains similarity to Pfam domains PF00568 (WH1 domain), PF08776 (VASP tetramerisation domain); contains similarity to Interpro domains IPR011993 (PH-like domain superfamily), IPR038023 (VASP tetramerisation domain superfamily), IPR014885 (VASP tetramerisation), IPR042180 (), IPR000697 (WH1/EVH1 domain) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00094663 | ||||
| Corresponding_transcript | PPA05109.1 | |||||
| Corresponding_protein | PP57365 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S2844-29.38 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
