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WormBase Tree Display for CDS: PPA05279

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Name Class

PPA05279SMapS_parentSequencePPA_ChrI
StructureSource_exons (66)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-25.1
DB_remarkcontains similarity to Pfam domains PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain), PF00083 (Sugar (and other) transporter); contains similarity to Interpro domains IPR001881 (EGF-like calcium-binding domain), IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR036259 (MFS transporter superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain), IPR005828 (Major facilitator, sugar transporter-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00094833
Corresponding_transcriptPPA05279.1
Corresponding_proteinPP65236
Corresponding_oligo_setGPL14372_Probes_50481
GPL14372_Probes_50482
GPL14372_Probes_6723
GPL14372_Probes_6724
GPL14372_Probes_6725
GPL14372_Probes_6728
GPL14372_Probes_6729
GPL14372_Probes_6730
Microarray_resultsGPL14372_Probes_6723
GPL14372_Probes_6724
GPL14372_Probes_6725
GPL14372_Probes_6728
GPL14372_Probes_6729
GPL14372_Probes_6730
GPL14372_Probes_50481
GPL14372_Probes_50482
RNASeq_FPKMWBls:00000323.56117From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-25.1Curator_confirmedWBPerson4055
Methodcurated