WormBase Tree Display for CDS: PPA05416
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PPA05416 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 69 | |||
469 | 594 | |||||
1081 | 1167 | |||||
1247 | 1325 | |||||
1970 | 2060 | |||||
2111 | 2188 | |||||
2257 | 2367 | |||||
2485 | 2605 | |||||
5029 | 5250 | |||||
6560 | 6715 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-47.9 | ||
DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00094970 | ||||
Corresponding_transcript | PPA05416.1 | |||||
Corresponding_protein | PP57869 | |||||
Corresponding_oligo_set | GPL14372_Probes_10161 | |||||
GPL14372_Probes_10162 | ||||||
GPL14372_Probes_10163 | ||||||
GPL14372_Probes_10164 | ||||||
GPL14372_Probes_10165 | ||||||
GPL14372_Probes_10166 | ||||||
Microarray_results | GPL14372_Probes_10161 | |||||
GPL14372_Probes_10162 | ||||||
GPL14372_Probes_10163 | ||||||
GPL14372_Probes_10164 | ||||||
GPL14372_Probes_10165 | ||||||
GPL14372_Probes_10166 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-47.9 | Curator_confirmed | WBPerson4055 | |||
Method | curated |