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WormBase Tree Display for CDS: PPA05592

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Name Class

PPA05592SMapS_parentSequencePPA_ChrII
StructureSource_exons (35)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S273-4.5
DB_remarkPPA-JIP-1 protein; contains similarity to Pfam domains PF00640 (Phosphotyrosine interaction domain (PTB/PID)), PF14604 (Variant SH3 domain); contains similarity to Interpro domains IPR036028 (SH3-like domain superfamily), IPR001452 (SH3 domain), IPR011993 (PH-like domain superfamily), IPR006020 (PTB/PI domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00095146
Corresponding_transcriptPPA05592.1
Corresponding_proteinPP60950
Corresponding_oligo_set (11)
Microarray_results (11)
RNASeq_FPKMWBls:00000322.4018From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.41821From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S273-4.5Curator_confirmedWBPerson4055
Methodcurated