WormBase Tree Display for CDS: PPA06058
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PPA06058 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 136 | |||
299 | 425 | |||||
555 | 590 | |||||
806 | 878 | |||||
1051 | 1131 | |||||
1177 | 1356 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2838-11.15 | ||
DB_remark | PPA-GRL-31 protein; contains similarity to Pfam domain PF04155 (Ground-like domain); contains similarity to Interpro domain IPR007284 (Ground-like domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00095612 | ||||
Corresponding_transcript | PPA06058.1 | |||||
Corresponding_protein | PP28772 | |||||
Corresponding_oligo_set | GPL14372_Probes_45724 | |||||
GPL14372_Probes_45725 | ||||||
GPL14372_Probes_45726 | ||||||
Microarray_results | GPL14372_Probes_45724 | |||||
GPL14372_Probes_45725 | ||||||
GPL14372_Probes_45726 | ||||||
RNASeq_FPKM | WBls:0000032 | 30.0147 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2838-11.15 | Curator_confirmed | WBPerson4055 | |||
Method | curated |