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WormBase Tree Display for CDS: PPA06121

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Name Class

PPA06121SMapS_parentSequencePPA_ChrIV
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2838-8.52
DB_remarkcontains similarity to Pfam domain PF11717 (RNA binding activity-knot of a chromodomain); contains similarity to Interpro domains IPR016197 (Chromo-like domain superfamily), IPR000953 (Chromo/chromo shadow domain), IPR025995 (RNA binding activity-knot of a chromodomain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00095675
Corresponding_transcriptPPA06121.1
Corresponding_proteinPP67754
Corresponding_oligo_setGPL14372_Probes_45873
GPL14372_Probes_45874
GPL14372_Probes_45875
GPL14372_Probes_45876
GPL14372_Probes_45877
GPL14372_Probes_45878
GPL14372_Probes_45879
Microarray_resultsGPL14372_Probes_45873
GPL14372_Probes_45874
GPL14372_Probes_45875
GPL14372_Probes_45876
GPL14372_Probes_45877
GPL14372_Probes_45878
GPL14372_Probes_45879
RNASeq_FPKMWBls:00000322.32906From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2838-8.52Curator_confirmedWBPerson4055
Methodcurated