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WormBase Tree Display for CDS: PPA06882

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Name Class

PPA06882SMapS_parentSequencePPA_ChrI
StructureSource_exons (157)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-20.43
DB_remarkPPA-PSMD-9 protein; contains similarity to Pfam domains PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd), PF18265 (Nas2 N_terminal domain); contains similarity to Interpro domains IPR040815 (Nas2, N-terminal), IPR036034 (PDZ superfamily), IPR033489 (), IPR019421 (7TM GPCR, serpentine receptor class d (Srd))
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00096436
Corresponding_transcriptPPA06882.1
Corresponding_proteinPP68730
Corresponding_oligo_set (34)
Matching_cDNAFG103491Inferred_automaticallytranscript_builder.pl
Microarray_results (34)
RNASeq_FPKMWBls:00000322.33233From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010111.7679From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-20.43Curator_confirmedWBPerson4055
Methodcurated