WormBase Tree Display for CDS: PPA06925

PPA06925 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 64
      125 237
      322 427
      1758 1869
      2168 2261
      2506 2569
      3592 3662
  DB_info: Database: pristionchus.org cds gene-UMM-S139-22.57
    DB_remark: contains similarity to Pfam domain PF00071 (Ras family); contains similarity to Interpro domains IPR001806 (Small GTPase), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR005225 (Small GTP-binding protein domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Confirmed
    Start_not_found: 1
  Visible: Gene: WBGene00096479
    Corresponding_transcript: PPA06925.1
    Corresponding_protein: PP74967
    Corresponding_oligo_set: GPL14372_Probes_54511
      GPL14372_Probes_54513
      GPL14372_Probes_9188
      GPL14372_Probes_9189
    Matching_cDNA: FE935732 Inferred_automatically: transcript_builder.pl
      FG098854 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_9188
      GPL14372_Probes_9189
      GPL14372_Probes_54511
      GPL14372_Probes_54513
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 14.5787 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 22 Jul 2019 16:56:59 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S139-22.57 Curator_confirmed: WBPerson4055
      [190722 mh6] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated