WormBase Tree Display for CDS: PPA06937
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PPA06937 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 264 | |||
307 | 372 | |||||
412 | 526 | |||||
570 | 663 | |||||
984 | 1102 | |||||
1150 | 1211 | |||||
1337 | 1459 | |||||
1502 | 1641 | |||||
1700 | 1801 | |||||
1847 | 1952 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-22.61 | ||
DB_remark | contains similarity to Pfam domain PF03125 (Sre G protein-coupled chemoreceptor); contains similarity to Interpro domain IPR004151 (7TM GPCR, serpentine receptor class e (Sre)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00096491 | ||||
Corresponding_transcript | PPA06937.1 | |||||
Corresponding_protein | PP60551 | |||||
Corresponding_oligo_set | GPL14372_Probes_9180 | |||||
GPL14372_Probes_9181 | ||||||
Microarray_results | GPL14372_Probes_9180 | |||||
GPL14372_Probes_9181 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S139-22.61 | Curator_confirmed | WBPerson4055 | |||
Method | curated |