Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA06953

expand all nodes | collapse all nodes | view schema

Name Class

PPA06953SMapS_parentSequencePPA_ChrI
StructureSource_exons193
344445
699784
10091122
55495679
58435930
61116175
63556446
66306723
69547054
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-23.33
DB_remarkcontains similarity to Pfam domain PF00782 (Dual specificity phosphatase, catalytic domain); contains similarity to Interpro domains IPR020422 (Dual specificity protein phosphatase domain), IPR029021 (Protein-tyrosine phosphatase-like), IPR016278 (Dual specificity protein phosphatase 12), IPR000340 (Dual specificity phosphatase, catalytic domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00096507
Corresponding_transcriptPPA06953.1
Corresponding_proteinPP68865
Corresponding_oligo_setGPL14372_Probes_54444
GPL14372_Probes_9171
GPL14372_Probes_9173
GPL14372_Probes_9174
Matching_cDNAFE935334Inferred_automaticallytranscript_builder.pl
FG104681Inferred_automaticallytranscript_builder.pl
FG102400Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_9171
GPL14372_Probes_9173
GPL14372_Probes_9174
GPL14372_Probes_54444
RNASeq_FPKMWBls:000003256.9671From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010122.429From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-23.33Curator_confirmedWBPerson4055
Methodcurated