WormBase Tree Display for CDS: PPA06983
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PPA06983 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (21) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S139-25.33 | ||
TREEFAM | TREEFAM_ID | TF300522 | ||||
DB_remark | PPA-CLH-4 protein; contains similarity to Pfam domain PF00654 (Voltage gated chloride channel); contains similarity to Interpro domains IPR014743 (Chloride channel, core), IPR001807 (Chloride channel, voltage gated) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00096537 | ||||
Corresponding_transcript | PPA06983.1 | |||||
Corresponding_protein | PP65522 | |||||
Corresponding_oligo_set | GPL14372_Probes_54390 | |||||
GPL14372_Probes_54391 | ||||||
GPL14372_Probes_54392 | ||||||
Microarray_results | GPL14372_Probes_54390 | |||||
GPL14372_Probes_54391 | ||||||
GPL14372_Probes_54392 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 10.4546 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S139-25.33 | Curator_confirmed | WBPerson4055 | |||
Method | curated |